Index A | B | C | D | F | G | H | I | L | M | N | P | R | S | T | U | V | W | Z A add_ax() (marsilea.layout.CrossLayout method) add_bottom() (marsilea.base.WhiteBoard method) add_canvas() (marsilea.base.WhiteBoard method) add_dendrogram() (marsilea.base.ClusterBoard method) add_intersections() (marsilea.upset.Upset method) add_items_attr() (marsilea.upset.Upset method) add_layer() (marsilea.base.WhiteBoard method) add_left() (marsilea.base.WhiteBoard method) add_legend_ax() (marsilea.layout.CompositeCrossLayout method) (marsilea.layout.CrossLayout method) add_legends() (marsilea.base.LegendMaker method) add_pad() (marsilea.base.WhiteBoard method) (marsilea.layout.CrossLayout method) add_plot() (marsilea.base.WhiteBoard method) add_right() (marsilea.base.WhiteBoard method) add_sets_attr() (marsilea.upset.Upset method) add_sets_label() (marsilea.upset.Upset method) add_sets_size() (marsilea.upset.Upset method) add_title() (marsilea.base.WhiteBoard method) add_top() (marsilea.base.WhiteBoard method) align_pos (marsilea.plotter.Title attribute) allow_labeling (marsilea.plotter.base.RenderPlan attribute) allow_split (marsilea.plotter.base.RenderPlan attribute) (marsilea.plotter.Title attribute) AnnoLabels (class in marsilea.plotter) append() (marsilea.base.WhiteBoard method) (marsilea.layout.CompositeCrossLayout method) (marsilea.layout.CrossLayout method) Arc (class in marsilea.plotter) ax (marsilea.plotter.base.RenderSpec attribute) B Bar (class in marsilea.plotter) binary_table() (marsilea.upset.UpsetData method) Box (class in marsilea.plotter) Boxen (class in marsilea.plotter) C cardinality() (marsilea.upset.UpsetData method) CatHeatmap (class in marsilea) CenterBar (class in marsilea.plotter) Chunk (class in marsilea.plotter) cluster_col() (marsilea.Deformation method) cluster_row() (marsilea.Deformation method) ClusterBoard (class in marsilea.base) col_breakpoints (marsilea.Deformation attribute) col_chunk_index (marsilea.Deformation attribute) col_cluster (marsilea.base.ClusterBoard property) col_cluster_kws (marsilea.Deformation attribute) col_dendrogram (marsilea.Deformation attribute) col_linkage (marsilea.Deformation attribute) col_ratios (marsilea.Deformation property) col_reorder_index (marsilea.Deformation attribute) col_split_order (marsilea.Deformation attribute) ColorMesh (class in marsilea.plotter) Colors (class in marsilea.plotter) CompositeCrossLayout (class in marsilea.layout) CrossLayout (class in marsilea.layout) current_ix (marsilea.plotter.base.RenderSpec attribute) custom_legends() (marsilea.base.LegendMaker method) D data (marsilea.Deformation attribute) (marsilea.plotter.base.RenderSpec attribute) data_col_reindex (marsilea.Deformation attribute) data_row_reindex (marsilea.Deformation attribute) data_validator() (marsilea.plotter.base.RenderPlan method) default_rotation (marsilea.plotter.Title attribute) deform (marsilea.plotter.base.RenderPlan attribute) Deformation (class in marsilea) degree() (marsilea.upset.UpsetData method) F figure (marsilea.base.WhiteBoard attribute) (marsilea.layout.CompositeCrossLayout attribute) filter() (marsilea.upset.UpsetData method) FixedChunk (class in marsilea.plotter) freeze() (marsilea.layout.CompositeCrossLayout method) (marsilea.layout.CrossLayout method) from_memberships() (marsilea.upset.UpsetData class method) from_sets() (marsilea.upset.UpsetData class method) G get_ax() (marsilea.base.WhiteBoard method) (marsilea.layout.CompositeCrossLayout method) (marsilea.layout.CrossLayout method) get_bbox_height() (marsilea.layout.CompositeCrossLayout method) (marsilea.layout.CrossLayout method) get_bbox_size() (marsilea.layout.CompositeCrossLayout method) (marsilea.layout.CrossLayout method) get_bbox_width() (marsilea.layout.CompositeCrossLayout method) (marsilea.layout.CrossLayout method) get_canvas_size() (marsilea.plotter.base.RenderPlan method) get_col_dendrogram() (marsilea.Deformation method) get_col_linkage() (marsilea.base.ClusterBoard method) (marsilea.Deformation method) get_data() (marsilea.Deformation method) (marsilea.plotter.base.RenderPlan method) (marsilea.upset.Upset method) get_deform() (marsilea.base.ClusterBoard method) get_deform_func() (marsilea.plotter.base.RenderPlan method) get_figure_size() (marsilea.layout.CompositeCrossLayout method) (marsilea.layout.CrossLayout method) get_group_data() (marsilea.plotter.base.RenderPlan method) get_group_params() (marsilea.plotter.base.RenderPlan method) get_intersection_ax() (marsilea.upset.Upset method) get_items_attr() (marsilea.upset.UpsetData method) get_legend_ax() (marsilea.layout.CompositeCrossLayout method) (marsilea.layout.CrossLayout method) get_legends() (marsilea.plotter.base.RenderPlan method) get_main_anchor() (marsilea.layout.CompositeCrossLayout method) (marsilea.layout.CrossLayout method) get_main_ax() (marsilea.base.WhiteBoard method) (marsilea.layout.CrossLayout method) get_main_height() (marsilea.layout.CrossLayout method) get_main_width() (marsilea.layout.CrossLayout method) get_params() (marsilea.plotter.base.RenderPlan method) get_render_spec() (marsilea.plotter.base.RenderPlan method) get_row_dendrogram() (marsilea.Deformation method) get_row_linkage() (marsilea.base.ClusterBoard method) (marsilea.Deformation method) get_sets_label_ax() (marsilea.upset.Upset method) get_sets_size_ax() (marsilea.upset.Upset method) get_side_size() (marsilea.layout.CompositeCrossLayout method) (marsilea.layout.CrossLayout method) get_split_regroup() (marsilea.plotter.base.RenderPlan method) group_data (marsilea.plotter.base.RenderSpec attribute) group_params (marsilea.plotter.base.RenderSpec attribute) H has_deform (marsilea.plotter.base.RenderPlan property) has_item() (marsilea.upset.UpsetData method) Heatmap (class in marsilea) highlight_subsets() (marsilea.upset.Upset method) hspace (marsilea.Deformation attribute) hsplit() (marsilea.base.ClusterBoard method) (marsilea.layout.CrossLayout method) I initiate_axes() (marsilea.layout.CrossLayout method) intersection() (marsilea.upset.UpsetData method) intersection_count() (marsilea.upset.UpsetData method) is_body (marsilea.plotter.base.RenderPlan property) is_cluster (marsilea.Deformation property) is_col_cluster (marsilea.Deformation attribute) is_col_split (marsilea.Deformation attribute) is_first (marsilea.plotter.base.RenderSpec property) is_flank (marsilea.plotter.base.RenderPlan property) is_last (marsilea.plotter.base.RenderSpec property) is_row_cluster (marsilea.Deformation attribute) is_row_split (marsilea.Deformation attribute) is_split (marsilea.Deformation property) (marsilea.plotter.base.RenderPlan property) is_split() (marsilea.layout.CrossLayout method) items (marsilea.upset.UpsetData property) items_attrs (marsilea.upset.UpsetData property) L label (marsilea.plotter.base.RenderPlan attribute) Labels (class in marsilea.plotter) Layers (class in marsilea.layers) LayersMesh (class in marsilea.layers) layout (marsilea.base.LegendMaker attribute) (marsilea.base.WhiteBoard attribute) LegendMaker (class in marsilea.base) M mark() (marsilea.upset.UpsetData method) MarkerMesh (class in marsilea.plotter) N name (marsilea.plotter.base.RenderPlan attribute) Numbers (class in marsilea.plotter) P params (marsilea.plotter.base.RenderSpec attribute) plot() (marsilea.layout.CompositeCrossLayout method) (marsilea.layout.CrossLayout method) Point (class in marsilea.plotter) R reindex_by_chunk() (marsilea.plotter.base.RenderPlan method) remove_ax() (marsilea.layout.CrossLayout method) remove_legend_ax() (marsilea.layout.CrossLayout method) remove_legends() (marsilea.base.LegendMaker method) render() (marsilea.base.WhiteBoard method) (marsilea.plotter.base.RenderPlan method) render_ax() (marsilea.plotter.base.RenderPlan method) render_main (marsilea.layers.LayersMesh attribute) (marsilea.plotter.Arc attribute) (marsilea.plotter.base.RenderPlan attribute) (marsilea.plotter.MarkerMesh attribute) (marsilea.plotter.SeqLogo attribute) RenderPlan (class in marsilea.plotter.base) RenderSpec (class in marsilea.plotter.base) reorder_by_col() (marsilea.Deformation method) reorder_by_row() (marsilea.Deformation method) reset() (marsilea.upset.UpsetData method) row_breakpoints (marsilea.Deformation attribute) row_chunk_index (marsilea.Deformation attribute) row_cluster (marsilea.base.ClusterBoard property) row_cluster_kws (marsilea.Deformation attribute) row_dendrogram (marsilea.Deformation attribute) row_linkage (marsilea.Deformation attribute) row_ratios (marsilea.Deformation property) row_reorder_index (marsilea.Deformation attribute) row_split_order (marsilea.Deformation attribute) S save() (marsilea.base.WhiteBoard method) SeqLogo (class in marsilea.plotter) set() (marsilea.plotter.base.RenderPlan method) set_anchor() (marsilea.layout.CompositeCrossLayout method) (marsilea.layout.CrossLayout method) set_cluster() (marsilea.Deformation method) set_col_chunk_order() (marsilea.Deformation method) set_data() (marsilea.Deformation method) (marsilea.plotter.base.RenderPlan method) set_data_col_reindex() (marsilea.Deformation method) set_data_row_reindex() (marsilea.Deformation method) set_deform() (marsilea.plotter.base.RenderPlan method) set_figsize() (marsilea.layout.CrossLayout method) set_group_data() (marsilea.plotter.base.RenderPlan method) set_group_params() (marsilea.plotter.base.RenderPlan method) set_label() (marsilea.plotter.base.RenderPlan method) set_layout() (marsilea.layout.CrossLayout method) set_legend_size() (marsilea.layout.CompositeCrossLayout method) (marsilea.layout.CrossLayout method) set_legends() (marsilea.plotter.base.RenderPlan method) set_main_height() (marsilea.layout.CrossLayout method) set_main_width() (marsilea.layout.CrossLayout method) set_margin() (marsilea.base.WhiteBoard method) set_params() (marsilea.plotter.base.RenderPlan method) set_render_size() (marsilea.layout.CrossLayout method) set_row_chunk_order() (marsilea.Deformation method) set_side() (marsilea.plotter.base.RenderPlan method) set_size() (marsilea.plotter.base.RenderPlan method) set_split_col() (marsilea.Deformation method) set_split_regroup() (marsilea.plotter.base.RenderPlan method) set_split_row() (marsilea.Deformation method) sets_attrs (marsilea.upset.UpsetData property) sets_names (marsilea.upset.UpsetData property) sets_size() (marsilea.upset.UpsetData method) sets_table() (marsilea.upset.UpsetData method) side (marsilea.plotter.base.RenderPlan attribute) size (marsilea.plotter.base.RenderPlan attribute) SizedHeatmap (class in marsilea) SizedMesh (class in marsilea.plotter) sort_sets() (marsilea.upset.UpsetData method) sort_subsets() (marsilea.upset.UpsetData method) split_by_col() (marsilea.Deformation method) split_by_row() (marsilea.Deformation method) split_cross() (marsilea.Deformation method) square (marsilea.base.ClusterBoard attribute) StackBar (class in marsilea.plotter) Strip (class in marsilea.plotter) Swarm (class in marsilea.plotter) T Title (class in marsilea.plotter) total (marsilea.plotter.base.RenderSpec attribute) transform() (marsilea.Deformation method) transform_col() (marsilea.Deformation method) transform_row() (marsilea.Deformation method) U update_attr_plotter() (marsilea.upset.Upset class method) update_main_canvas_size() (marsilea.plotter.base.RenderPlan method) (marsilea.plotter.SizedMesh method) Upset (class in marsilea.upset) UpsetData (class in marsilea.upset) V Violin (class in marsilea.plotter) vsplit() (marsilea.base.ClusterBoard method) (marsilea.layout.CrossLayout method) W WhiteBoard (class in marsilea.base) wspace (marsilea.Deformation attribute) Z zorder (marsilea.plotter.base.RenderPlan attribute)
