Index A | B | C | D | E | F | G | H | I | L | M | N | O | P | R | S | T | U | V | W | Z A add_ax() (CrossLayout method) add_bottom() (WhiteBoard method) add_canvas() (WhiteBoard method) add_clinical_data() (OncoPrint method) add_dendrogram() (ClusterBoard method) add_heatmap_data() (OncoPrint method) add_intersections() (Upset method) add_items_attr() (Upset method) add_layer() (WhiteBoard method) add_left() (WhiteBoard method) add_legend_ax() (CompositeCrossLayout method) (CrossLayout method) add_legends() (LegendMaker method) add_pad() (CrossLayout method) (WhiteBoard method) add_plot() (WhiteBoard method) add_right() (WhiteBoard method) add_sets_attr() (Upset method) add_sets_label() (Upset method) add_sets_size() (Upset method) add_title() (WhiteBoard method) add_top() (WhiteBoard method) align_pos (Title attribute) allow_labeling (RenderPlan attribute) allow_split (RenderPlan attribute) (Title attribute) AnnoLabels (class in marsilea.plotter) append() (CompositeCrossLayout method) (CrossLayout method) (WhiteBoard method) Arc (class in marsilea.plotter) Area (class in marsilea.plotter) ax (RenderSpec attribute) B Bar (class in marsilea.plotter) binary_table() (UpsetData method) Box (class in marsilea.plotter) Boxen (class in marsilea.plotter) C cardinality() (UpsetData method) CatHeatmap (class in marsilea) CenterBar (class in marsilea.plotter) Chunk (class in marsilea.plotter) clinical_plots (OncoPrint attribute) cluster_col() (Deformation method) cluster_row() (Deformation method) ClusterBoard (class in marsilea.base) col_breakpoints (Deformation attribute) col_chunk_index (Deformation attribute) col_cluster (ClusterBoard property) col_cluster_kws (Deformation attribute) col_dendrogram (Deformation attribute) col_linkage (Deformation attribute) col_ratios (Deformation property) col_reorder_index (Deformation attribute) col_split_order (Deformation attribute) ColorMesh (class in marsilea.plotter) Colors (class in marsilea.plotter) CompositeCrossLayout (class in marsilea.layout) CrossLayout (class in marsilea.layout) current_ix (RenderSpec attribute) custom_legend() (LegendMaker method) cut_cols() (ClusterBoard method) cut_rows() (ClusterBoard method) D data (Deformation attribute) (RenderSpec attribute) data_col_reindex (Deformation attribute) data_row_reindex (Deformation attribute) data_validator() (RenderPlan method) default_rotation (Title attribute) deform (RenderPlan attribute) Deformation (class in marsilea) degree() (UpsetData method) E Emoji (class in marsilea.plotter) F figure (CompositeCrossLayout attribute) (WhiteBoard attribute) filter() (UpsetData method) FixedChunk (class in marsilea.plotter) freeze() (CompositeCrossLayout method) (CrossLayout method) from_memberships() (UpsetData class method) from_sets() (UpsetData class method) G get_ax() (CompositeCrossLayout method) (CrossLayout method) (WhiteBoard method) get_bbox_height() (CompositeCrossLayout method) (CrossLayout method) get_bbox_size() (CompositeCrossLayout method) (CrossLayout method) get_bbox_width() (CompositeCrossLayout method) (CrossLayout method) get_canvas_size() (RenderPlan method) get_col_dendrogram() (Deformation method) get_col_linkage() (ClusterBoard method) (Deformation method) get_data() (Deformation method) (RenderPlan method) (Upset method) get_deform() (ClusterBoard method) get_deform_func() (RenderPlan method) get_figure_size() (CompositeCrossLayout method) (CrossLayout method) get_group_data() (RenderPlan method) get_group_params() (RenderPlan method) get_intersection_ax() (Upset method) get_items_attr() (UpsetData method) get_legend_ax() (CompositeCrossLayout method) (CrossLayout method) get_legends() (RenderPlan method) get_main_anchor() (CompositeCrossLayout method) (CrossLayout method) get_main_ax() (CrossLayout method) (WhiteBoard method) get_main_height() (CrossLayout method) get_main_width() (CrossLayout method) get_params() (RenderPlan method) get_render_spec() (RenderPlan method) get_row_dendrogram() (Deformation method) get_row_linkage() (ClusterBoard method) (Deformation method) get_sets_label_ax() (Upset method) get_sets_size_ax() (Upset method) get_side_size() (CompositeCrossLayout method) (CrossLayout method) get_split_regroup() (RenderPlan method) group_cols() (ClusterBoard method) group_data (RenderSpec attribute) group_params (RenderSpec attribute) group_rows() (ClusterBoard method) H has_deform (RenderPlan property) has_item() (UpsetData method) Heatmap (class in marsilea) highlight_subsets() (Upset method) hspace (Deformation attribute) hsplit() (ClusterBoard method) (CrossLayout method) I Image (class in marsilea.plotter) initiate_axes() (CrossLayout method) intersection() (UpsetData method) intersection_count() (UpsetData method) is_body (RenderPlan property) is_cluster (Deformation property) is_col_cluster (Deformation attribute) is_col_split (Deformation attribute) is_first (RenderSpec property) is_flank (RenderPlan property) is_last (RenderSpec property) is_row_cluster (Deformation attribute) is_row_split (Deformation attribute) is_split (Deformation property) (RenderPlan property) is_split() (CrossLayout method) items (UpsetData property) items_attrs (UpsetData property) L label (RenderPlan attribute) Labels (class in marsilea.plotter) Layers (class in marsilea.layers) LayersMesh (class in marsilea.layers) layout (LegendMaker attribute) (WhiteBoard attribute) LegendMaker (class in marsilea.base) M mark() (UpsetData method) MarkerMesh (class in marsilea.plotter) N name (RenderPlan attribute) Numbers (class in marsilea.plotter) O OncoPrint (class in oncoprinter) P params (RenderSpec attribute) plot() (CompositeCrossLayout method) (CrossLayout method) Point (class in marsilea.plotter) R reindex_by_chunk() (RenderPlan method) remove_ax() (CrossLayout method) remove_legend_ax() (CrossLayout method) remove_legends() (LegendMaker method) render() (RenderPlan method) (WhiteBoard method) render_ax() (RenderPlan method) render_main (Arc attribute) (LayersMesh attribute) (MarkerMesh attribute) (RenderPlan attribute) (SeqLogo attribute) (TextMesh attribute) RenderPlan (class in marsilea.plotter.base) RenderSpec (class in marsilea.plotter.base) reorder_by_col() (Deformation method) reorder_by_row() (Deformation method) reset() (UpsetData method) row_breakpoints (Deformation attribute) row_chunk_index (Deformation attribute) row_cluster (ClusterBoard property) row_cluster_kws (Deformation attribute) row_dendrogram (Deformation attribute) row_linkage (Deformation attribute) row_ratios (Deformation property) row_reorder_index (Deformation attribute) row_split_order (Deformation attribute) S samples_order (OncoPrint property) save() (WhiteBoard method) SeqLogo (class in marsilea.plotter) set() (RenderPlan method) set_anchor() (CompositeCrossLayout method) (CrossLayout method) set_cluster() (Deformation method) set_col_chunk_order() (Deformation method) set_data() (Deformation method) (RenderPlan method) set_data_col_reindex() (Deformation method) set_data_row_reindex() (Deformation method) set_deform() (RenderPlan method) set_figsize() (CrossLayout method) set_group_data() (RenderPlan method) set_group_params() (RenderPlan method) set_label() (RenderPlan method) set_layout() (CrossLayout method) set_legend_size() (CompositeCrossLayout method) (CrossLayout method) set_legends() (RenderPlan method) set_main_height() (CrossLayout method) set_main_width() (CrossLayout method) set_margin() (WhiteBoard method) set_params() (RenderPlan method) set_render_size() (CrossLayout method) set_row_chunk_order() (Deformation method) set_side() (RenderPlan method) set_size() (RenderPlan method) set_split_col() (Deformation method) set_split_regroup() (RenderPlan method) set_split_row() (Deformation method) sets_attrs (UpsetData property) sets_names (UpsetData property) sets_size() (UpsetData method) sets_table() (UpsetData method) side (RenderPlan attribute) size (RenderPlan attribute) SizedHeatmap (class in marsilea) SizedMesh (class in marsilea.plotter) sort_sets() (UpsetData method) sort_subsets() (UpsetData method) split_by_col() (Deformation method) split_by_row() (Deformation method) split_cross() (Deformation method) StackBar (class in marsilea.plotter) Strip (class in marsilea.plotter) Swarm (class in marsilea.plotter) T TextMesh (class in marsilea.plotter) Title (class in marsilea.plotter) total (RenderSpec attribute) tracks_order (OncoPrint property) transform() (Deformation method) transform_col() (Deformation method) transform_row() (Deformation method) U update_attr_plotter() (Upset class method) update_main_canvas_size() (RenderPlan method) (SizedMesh method) Upset (class in marsilea.upset) UpsetData (class in marsilea.upset) V Violin (class in marsilea.plotter) vsplit() (ClusterBoard method) (CrossLayout method) W WhiteBoard (class in marsilea.base) wspace (Deformation attribute) Z ZeroHeight (class in marsilea.base) ZeroHeightCluster (class in marsilea.base) ZeroWidth (class in marsilea.base) ZeroWidthCluster (class in marsilea.base) zorder (RenderPlan attribute)
